PET-BIDS, an extension to the brain imaging data structure for positron emission tomography
Martin Norgaard
(1, 2, 3)
,
Granville J Matheson
(4, 5, 6)
,
Hanne D Hansen
(2, 1)
,
Adam Thomas
(7)
,
Graham Searle
(8)
,
Gaia Rizzo
(8)
,
Mattia Veronese
(9, 10)
,
Alessio Giacomel
(9)
,
Maqsood Yaqub
(11, 12)
,
Matteo Tonietto
(13, 14)
,
Thomas Funck
(15)
,
Ashley Gillman
(16, 17)
,
Hugo Boniface
(18)
,
Alexandre Routier
(19, 20)
,
Jelle R Dalenberg
(21, 22)
,
Tobey Betthauser
(23, 24)
,
Franklin Feingold
(3)
,
Christopher J Markiewicz
(3)
,
Krzysztof J Gorgolewski
(3)
,
Ross W Blair
(3)
,
Stefan Appelhoff
(25, 26)
,
Remi Gau
(27)
,
Taylor Salo
(28)
,
Guiomar Niso
(29)
,
Cyril Pernet
(2, 1)
,
Christophe Phillips
(30)
,
Robert Oostenveld
(31, 32, 5)
,
Jean-Dominique Gallezot
(33)
,
Richard E Carson
(33)
,
Gitte M Knudsen
(2, 1)
,
Robert B Innis
(7, 34)
,
Melanie Ganz
(1, 2)
1
UCPH -
University of Copenhagen = Københavns Universitet
2 Rigshospitalet [Copenhagen]
3 Department of Psychology [Stanford]
4 Columbia University [New York]
5 Karolinska Institutet [Stockholm]
6 SLSO - Stockholm Health Care Services
7 NIMH - National Institute of Mental Health
8 Imperial College London
9 King‘s College London
10 Unipd - Università degli Studi di Padova = University of Padua
11 Amsterdam UMC - Amsterdam University Medical Centers
12 Department of Radiology and Nuclear Medicine [Amsterdam]
13 SHFJ - Service Hospitalier Frédéric Joliot
14 BIOMAPS - LaBoratoire d'Imagerie biOmédicale MultimodAle Paris-Saclay
15 INM-1 - Institute of Neuroscience and Medicine [Jülich]
16 The Australian e-Health Research centre
17 CSIRO - Commonwealth Scientific and Industrial Research Organisation [Australia]
18 CATI - Centre d'Acquisition et de Traitement des Images [Paris] = CATI Multicenter Neuroimaging Platform
19 ICM - Institut du Cerveau = Paris Brain Institute
20 ARAMIS - Algorithms, models and methods for images and signals of the human brain = Algorithmes, modèles et méthodes pour les images et les signaux du cerveau humain [ICM Paris]
21 University of Groningen [Groningen]
22 UMCG - University Medical Center Groningen [Groningen]
23 University of Wisconsin-Madison
24 University of Wisconsin School of Medicine and Public Health
25 Max Planck Institute for Human Development
26 ARC - Center for Adaptive Rationality [Berlin]
27 UCL - Université Catholique de Louvain = Catholic University of Louvain
28 FIU - Florida International University [Miami]
29 Indiana University [Bloomington]
30 Université de Liège
31 Donders Institute for Brain, Cognition and Behaviour
32 Radboud University [Nijmegen]
33 Yale University [New Haven]
34 NIH - National Institutes of Health [Bethesda, MD, USA]
2 Rigshospitalet [Copenhagen]
3 Department of Psychology [Stanford]
4 Columbia University [New York]
5 Karolinska Institutet [Stockholm]
6 SLSO - Stockholm Health Care Services
7 NIMH - National Institute of Mental Health
8 Imperial College London
9 King‘s College London
10 Unipd - Università degli Studi di Padova = University of Padua
11 Amsterdam UMC - Amsterdam University Medical Centers
12 Department of Radiology and Nuclear Medicine [Amsterdam]
13 SHFJ - Service Hospitalier Frédéric Joliot
14 BIOMAPS - LaBoratoire d'Imagerie biOmédicale MultimodAle Paris-Saclay
15 INM-1 - Institute of Neuroscience and Medicine [Jülich]
16 The Australian e-Health Research centre
17 CSIRO - Commonwealth Scientific and Industrial Research Organisation [Australia]
18 CATI - Centre d'Acquisition et de Traitement des Images [Paris] = CATI Multicenter Neuroimaging Platform
19 ICM - Institut du Cerveau = Paris Brain Institute
20 ARAMIS - Algorithms, models and methods for images and signals of the human brain = Algorithmes, modèles et méthodes pour les images et les signaux du cerveau humain [ICM Paris]
21 University of Groningen [Groningen]
22 UMCG - University Medical Center Groningen [Groningen]
23 University of Wisconsin-Madison
24 University of Wisconsin School of Medicine and Public Health
25 Max Planck Institute for Human Development
26 ARC - Center for Adaptive Rationality [Berlin]
27 UCL - Université Catholique de Louvain = Catholic University of Louvain
28 FIU - Florida International University [Miami]
29 Indiana University [Bloomington]
30 Université de Liège
31 Donders Institute for Brain, Cognition and Behaviour
32 Radboud University [Nijmegen]
33 Yale University [New Haven]
34 NIH - National Institutes of Health [Bethesda, MD, USA]
Hugo Boniface
- Function : Author
- PersonId : 1486781
- IdHAL : hugo-boniface
- ORCID : 0000-0002-0454-3294
Melanie Ganz
- Function : Correspondent author
Abstract
The Brain Imaging Data Structure (BIDS) is a standard for organizing and describing neuroimaging datasets, serving not only to facilitate the process of data sharing and aggregation, but also to simplify the application and development of new methods and software for working with neuroimaging data. Here, we present an extension of BIDS to include positron emission tomography (PET) data, also known as PET-BIDS, and share several open-access datasets curated following PET-BIDS along with tools for conversion, validation and analysis of PET-BIDS datasets.
Domains
Life Sciences [q-bio]| Origin | Publication funded by an institution |
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