Search - CEA - Commissariat à l’énergie atomique et aux énergies alternatives Access content directly

Filter your results

22 Results
Structure: Internal structure identifier : 182329

Human Proteome Project Mass Spectrometry Data Interpretation Guidelines 2.1

Eric W Deutsch , Christopher M. Overall , Jennifer van Eyk , Mark D. Baker , Young-Ki Paik , et al.
Journal of Proteome Research, 2016, 15 (11), pp.3961-3970. ⟨10.1021/acs.jproteome.6b00392⟩
Journal articles hal-02191414v1
Image document

The registry of software tools and data resources for the life sciences

Jon Ison , Hans Ienasescu , Piotr Chmura , Emil Rydza , Hervé Ménager , et al.
Genome Biology, 2019, 20 (164), pp.1-4. ⟨10.1186/s13059-019-1772-6⟩
Journal articles hal-02408472v1

Prediction of homo- and hetero-protein complexes by protein docking and template-based modeling: a CASP-CAPRI experiment

Marc F. Lensink , Sameer Velankar , Andriy Kryshtafovych , Shen-You Huang , Dina Schneidman-Duhovy , et al.
Proteins - Structure, Function and Bioinformatics, 2016, Special Issue: Eleventh Meeting on the Critical Assessment of Techniques for Protein Structure Prediction, 84 (S1), pp.323-348. ⟨10.1002/prot.25007⟩
Journal articles hal-01309105v1
Image document

The future of metabolomics in ELIXIR

M. van Rijswijk , C. Beirnaert , C. Caron , M. Cascante , V. Dominguez , et al.
F1000Research, 2017, 6 (Version 2), ⟨10.12688/f1000research.12342.2⟩
Journal articles hal-01630635v1

Guidelines for reporting the use of mass spectrometry informatics in proteomics

Pierre-Alain Binz , Robert Barkovich , Ronald Beavis , David Creasy , David M. Horn , et al.
Nature Biotechnology, 2008, 26, pp.862. ⟨10.1038/nbt0808-862⟩
Journal articles hal-02072534v1
Image document

Recommendations for the packaging and containerizing of bioinformatics software

Bjorn Gruening , Olivier Sallou , Pablo Moreno , Felipe da Veiga Leprevost , Hervé Ménager , et al.
F1000Research, 2018, 7, pp.742. ⟨10.12688/f1000research.15140.2⟩
Journal articles pasteur-02769991v1

Multiple adaptive solutions to face climatic constraints: novel insights in the debate over the role of convergence in local adaptation

Badr Benjelloun , Kevin Leempoel , Frédéric Boyer , Sylvie Stucki , Ian Streeter , et al.
Preprints, Working Papers, ... hal-04186277v1
Image document

Host transcriptomic plasticity and photosymbiotic fidelity underpin $Pocillopora$ acclimatization across thermal regimes in the Pacific Ocean

Eric J Armstrong , Julie Lê-Hoang , Quentin Carradec , Jean-Marc Aury , Benjamin Noel , et al.
Nature Communications, 2023, 14, pp.3056. ⟨10.1038/s41467-023-38610-6⟩
Journal articles cea-04171796v1
Image document

Guidelines for reporting the use of gel electrophoresis in proteomics.

Frank Gibson , Leigh Anderson , Gyorgy Babnigg , Mark D. Baker , Matthias Berth , et al.
Nat Biotechnol, 2008, 26 (8), pp.863-4. ⟨10.1038/nbt0808-863⟩
Journal articles hal-00373319v1
Image document

BioSimulators: a central registry of simulation engines and services for recommending specific tools

Bilal Shaikh , Lucian Smith , Dan Vasilescu , Gnaneswara Marupilla , Michael Wilson , et al.
Nucleic Acids Research, 2022, pp.1-7. ⟨10.1093/nar/gkac331⟩
Journal articles hal-03666382v1
Image document

Rfam 14: expanded coverage of metagenomic, viral and microRNA families

Ioanna Kalvari , Eric P. Nawrocki , Nancy Ontiveros-Palacios , Joanna Argasinska , Kevin Lamkiewicz , et al.
Nucleic Acids Research, 2020, ⟨10.1093/nar/gkaa1047⟩
Journal articles hal-03031715v1

Small-angle X-ray scattering- and nuclear magnetic resonance-derived conformational ensemble of the highly flexible antitoxin PaaA2.

Yann G J Sterckx , Alexander N Volkov , Wim F Vranken , Jaka Kragelj , Malene Ringkjøbing Jensen , et al.
Structure (London, England : 1993), 2014, 22 (6), pp.854-65
Journal articles hal-01131143v1
Image document

Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition

Adriana A. Alberti , Julie Poulain , Stefan Engelen , Karine Labadie , Sarah Romac , et al.
Scientific Data , 2017, 4, ⟨10.1038/sdata.2017.93⟩
Journal articles hal-01771844v1
Image document

Blind prediction of homo‐ and hetero‐ protein complexes: The CASP13‐CAPRI experiment

Marc Lensink , Guillaume Brysbaert , Nurul Nadzirin , Sameer Velankar , Raphaël A.G. Chaleil , et al.
Proteins - Structure, Function and Bioinformatics, 2019, 87 (12), pp.1200-1221. ⟨10.1002/prot.25838⟩
Journal articles hal-02320974v1
Image document

Convergent genomic signatures of domestication in sheep and goats

Florian Alberto , Frédéric Boyer , Pablo Orozco-Terwengel , Ian Streeter , Bertrand Servin , et al.
Nature Communications, 2018, 9 (1), pp.813. ⟨10.1038/s41467-018-03206-y⟩
Journal articles cea-01875703v1

Evolution of enzymes and pathways for the biosynthesis of cofactors.

Gemma L Holliday , Janet M Thornton , Andrée Marquet , Alison G Smith , Fabrice Rébeillé , et al.
Natural Product Reports, 2007, 24 (5), pp.972-87. ⟨10.1039/b703107f⟩
Journal articles istex hal-00188855v1
Image document

Gearing up to handle the mosaic nature of life in the quest for orthologs

Kristoffer Forslund , Cécile Pereira , Salvador Capella-Gutiérrez , Alan Sousa da Silva , Adrian M Altenhoff , et al.
Bioinformatics, 2018, 34 (2), pp.323-329. ⟨10.1093/bioinformatics/btx542⟩
Journal articles hal-01758841v1

Future opportunities and trends for e-infrastructures and life sciences: going beyond the grid to enable life science data analysis

Afonso M.S. Duarte , Fotis E. Psomopoulos , Christophe Blanchet , Alexandre M.J.J. Bonvin , Manuel Corpas , et al.
Frontiers in Genetics, 2015, 6, 7 p. ⟨10.3389/fgene.2015.00197⟩
Journal articles hal-02640749v1

The rainbow trout genome, an important landmark for aquaculture and genome evolution

Julien Bobe , Lucie Marandel , Stéphane Panserat , Pierre Boudinot , Camille Berthelot , et al.
Genomics in Aquaculture, Academic Press, 2016, 978-0-12-801418-9. ⟨10.1016/B978-0-12-801418-9.00002-0⟩
Book sections hal-01595642v1
Image document

Differences in carbonate chemistry up-regulation of long-lived reef-building corals

Marine Canesi , Éric Douville , Paolo Montagna , Marco Taviani , Jarosław Stolarski , et al.
Scientific Reports, 2023, 13 (1), pp.11589. ⟨10.1038/s41598-023-37598-9⟩
Journal articles cea-04170119v1
Image document

Transinteractome analysis reveals distinct niche requirements for isotype‐based plasma cell subsets in the bone marrow

Amélie Bonaud , Pierre Larraufie , Mélanie Khamyath , Ugo Szachnowski , Shaun M Flint , et al.
European Journal of Immunology, 2023, ⟨10.1002/eji.202250334⟩
Journal articles hal-04145276v1
Image document

A high-stringency blueprint of the human proteome

S Adhikari , Edouard C Nice , E Deutsch , Lydie Lane , Gilbert S Omenn , et al.
Nature Communications, 2020, 11 (1), pp.5301. ⟨10.1038/s41467-020-19045-9⟩
Journal articles hal-03004830v1