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Notip: Non-parametric True Discovery Proportion control for brain imaging

Alexandre Blain , Bertrand Thirion , Pierre Neuvial
NeuroImage, 2022, 260, pp.119492. ⟨10.1016/j.neuroimage.2022.119492⟩
Journal articles hal-03649114v3
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Speeding-up model-selection in GraphNet via early-stopping and univariate feature-screening

Elvis Dohmatob , Michael Eickenberg , Bertrand Thirion , Gaël Varoquaux
PRNI, Jun 2015, Stanford, United States
Conference papers hal-01147731v1
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Neuroimaging Research: From Null-Hypothesis Falsification to Out-of-sample Generalization

Danilo Bzdok , Gaël Varoquaux , Bertrand Thirion
Educational and Psychological Measurement, 2016
Journal articles hal-01338313v1
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Joint T1 and Brain Fiber Log-Demons Registration Using Currents to Model Geometry

Viviana Siless , Joan Glaunès , Pamela Guevara , Jean-François Mangin , Cyril Poupon , et al.
MICCAI, Oct 2012, Nice, France, France
Conference papers hal-00723367v1
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Improving sparse recovery on structured images with bagged clustering

Andrés Hoyos-Idrobo , Yannick Schwartz , Gaël Varoquaux , Bertrand Thirion
International Workshop On Pattern Recognition In Neuroimaging (PRNI), 2015, Jun 2015, Palo alto, United States
Conference papers hal-01174335v1
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An empirical evaluation of functional alignment using inter-subject decoding

Thomas Bazeille , Elizabeth Dupre , Hugo Richard , Jean-Baptiste Poline , Bertrand Thirion
Journal articles hal-03044779v3
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The functional database of the ARCHI project: Potential and perspectives

Philippe Pinel , Baudouin Forgeot d'Arc , Stanislas Dehaene , Thomas Bourgeron , Bertrand Thirion , et al.
NeuroImage, 2019, 197, pp.527-543. ⟨10.1016/j.neuroimage.2019.04.056⟩
Journal articles pasteur-03325415v1
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Seeing it all: Convolutional network layers map the function of the human visual system

Michael Eickenberg , Alexandre Gramfort , Gaël Varoquaux , Bertrand Thirion
Journal articles hal-01389809v1
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Feature Grouping as a Stochastic Regularizer for High-Dimensional Structured Data

Sergül Aydöre , Bertrand Thirion , Gaël Varoquaux
NeurIPS 2019 - 33th Annual Conference on Neural Information Processing Systems, Dec 2019, Vancouver, Canada
Conference papers hal-02318458v1
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Decoding with Confidence: Statistical Control on Decoder Maps

Jérôme-Alexis Chevalier , Tuan-Binh Nguyen , Joseph Salmon , Gaël Varoquaux , Bertrand Thirion
NeuroImage, 2021, pp.117921. ⟨10.1016/j.neuroimage.2021.117921⟩
Journal articles hal-03179728v1
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Multi-subject MEG/EEG source imaging with sparse multi-task regression

Hicham Janati , Thomas Bazeille , Bertrand Thirion , Marco Cuturi , Alexandre Gramfort
Preprints, Working Papers, ... hal-02304194v2
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Bootstrapped Permutation Test for Multiresponse Inference on Brain Behavior Associations

Bernard Ng , Jean Baptiste Poline , Bertrand Thirion , Michael D. Greicius
Information Processing in Medical Imaging 2015, Sebastien Ourselin, University College London, UK; Daniel Alexander, University College London, UK; Carl-Fredrik Westin, Harvard University, USA, Jun 2015, Sabhal Mor Ostaig, Isle of Skye, United Kingdom. pp.12
Conference papers hal-01185206v1
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Dictionary Learning for Massive Matrix Factorization

Arthur Mensch , Julien Mairal , Bertrand Thirion , Gaël Varoquaux
International Conference on Machine Learning, Jun 2016, New York, United States. pp.1737-1746
Conference papers hal-01308934v2
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Population-shrinkage of covariance to estimate better brain functional connectivity

Mehdi Rahim , Bertrand Thirion , Gaël Varoquaux
Medical Image Computing and Computer Assisted Interventions, Sep 2017, Quebec city, Canada
Conference papers hal-01547612v1
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From deep brain phenotyping to functional atlasing

Bertrand Thirion , Alexis Thual , Ana Luísa Pinho
Current Opinion in Behavioral Sciences, 2021, 40, pp.201-212. ⟨10.1016/j.cobeha.2021.05.004⟩
Journal articles hal-03289794v2
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Comprehensive decoding mental processes from Web repositories of functional brain images

Romuald Menuet , Raphael Meudec , Jérôme Dockès , Gaël Varoquaux , Bertrand Thirion
Scientific Reports, 2022, 12 (7050), ⟨10.1038/s41598-022-10710-1⟩
Journal articles hal-03666470v1
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Population modeling with machine learning can enhance measures of mental health

Kamalaker Dadi , Gaël Varoquaux , Josselin Houenou , Danilo Bzdok , Bertrand Thirion , et al.
Journal articles hal-03470466v1
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Deriving reproducible biomarkers from multi-site resting-state data: An Autism-based example

Alexandre Abraham , Michael Milham , Adriana Di Martino , R. Cameron Craddock , Dimitris Samaras , et al.
Journal articles hal-01398867v1
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Joint T1 and brain fiber diffeomorphic registration using the demons

Viviana Siless , Pamela Guevara , Xavier Pennec , Bertrand Thirion , Pierre Fillard
Organization for the Human Brain Mapping, Jun 2012, Beijing, China
Conference poster hal-00828387v1
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Correlations of correlations are not reliable statistics: implications for multivariate pattern analysis.

Bertrand Thirion , Fabian Pedregosa , Michael Eickenberg , Gaël Varoquaux
ICML Workshop on Statistics, Machine Learning and Neuroscience (Stamlins 2015), Bertrand Thirion, Lars Kai Hansen, Sanmi Koyejo, Jul 2015, Lille, France
Conference papers hal-01187297v1
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Semi-Supervised Factored Logistic Regression for High-Dimensional Neuroimaging Data

Danilo Bzdok , Michael Eickenberg , Olivier Grisel , Bertrand Thirion , Gaël Varoquaux
NIPS'15: 28th International Conference on Neural Information Processing Systems, Dec 2015, Montreal, Canada
Conference papers hal-01211248v1
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Towards a Faster Randomized Parcellation Based Inference

Andrés Hoyos-Idrobo , Gaël Varoquaux , Bertrand Thirion
PRNI 2017 - 7th International Workshop on Pattern Recognition in NeuroImaging, Jun 2017, Toronto, Canada
Conference papers hal-01552237v1
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Transmodal Learning of Functional Networks for Alzheimer's Disease Prediction

Mehdi Rahim , Bertrand Thirion , Claude Comtat , Gaël Varoquaux
IEEE Journal of Selected Topics in Signal Processing, 2016, 10 (7), pp.1204 - 1213. ⟨10.1109/JSTSP.2016.2600400⟩
Journal articles hal-01353728v1
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Brain-based ranking of cognitive domains to predict schizophrenia

Teresa M Karrer , Danielle S. Bassett , Birgit Derntl , Oliver Gruber , Andre Aleman , et al.
Human Brain Mapping, 2019, 40, pp.4487-4507. ⟨10.1002/hbm.24716⟩
Journal articles hal-02180311v1
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Individual Brain Charting dataset extension, second release of high-resolution fMRI data for cognitive mapping

Ana Luísa Pinho , Alexis Amadon , Baptiste Gauthier , Nicolas Clairis , André Knops , et al.
Scientific Data , In press, ⟨10.1038/s41597-020-00670-4⟩
Journal articles hal-02973046v1
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Joint prediction of multiple scores captures better individual traits from brain images

Mehdi Rahim , Bertrand Thirion , Danilo Bzdok , Irène Buvat , Gaël Varoquaux
Journal articles hal-01547524v1
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Mapping the asynchrony of cortical maturation in the infant brain: a MRI multi-parametric clustering approach

Jessica Lebenberg , Jean-François Mangin , Bertrand Thirion , Cyril Poupon , Lucie Hertz-Pannier , et al.
NeuroImage, 2019, 185, pp.641-653. ⟨10.1016/j.neuroimage.2018.07.022⟩
Journal articles hal-01966812v1

Tissue outcome prediction in hyperacute ischemic stroke: Comparison of machine learning models

Joseph Benzakoun , Sylvain Charron , Guillaume Turc , Wagih Ben Hassen , Laurence Legrand , et al.
Journal of Cerebral Blood Flow and Metabolism, 2021, pp.0271678X2110243. ⟨10.1177/0271678X211024371⟩
Journal articles hal-03329129v1

Random Forests based feature selection for decoding fMRI data

Robin Genuer , Vincent Michel , Evelyn Eger , Bertrand Thirion
COMPSTAT 2010 - 19th International Conference on Computational Statistics, Aug 2010, Paris, France. pp.1071-1078
Conference papers hal-00944114v1
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How machine learning is shaping cognitive neuroimaging

Gaël Varoquaux , Bertrand Thirion
GigaScience, 2014, 3, pp.28. ⟨10.1186/2047-217X-3-28⟩
Journal articles hal-01094737v1