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Modelling the muscle metabolic response in anabolic and catabolic states using arterio-venous blood metabolomics profiles

Nathalie Poupin , Florence A Castelli , Emeline Chu-Van , Didier Remond , Dominique Dardevet , et al.
8. Conference on Constraint-Based reconstruction and Analysis (COBRA 2022), Sep 2022, Galway, Ireland
Conference papers hal-03807737v1

Annotation of the human serum metabolome by coupling three liquid chromatography methods to high‐resolution mass spectrometry

Marie‐françoise Olivier , Sandrine Aros‐calt , Lydie Oliveira , François Fenaille , Jean‐claude Tabet , et al.
Journal of Chromatography B - Analytical Technologies in the Biomedical and Life Sciences, 2014, 966, pp.34--47. ⟨10.1016/j.jchromb.2014.04.025⟩
Journal articles hal-01664192v1

CDG biochemical screening: Where do we stand?

Arnaud Bruneel , Sophie Cholet , N Thuy Tran , Thanh Duc Mai , François Fenaille
Biochimica et Biophysica Acta (BBA) - General Subjects, 2020, 1864 (10), ⟨10.1016/j.bbagen.2020.129652⟩
Journal articles hal-03320709v1

Development of a standard protocol for high-throughput metabolomic fingerprinting of biofluids using FIA- and Nano-ESI coupled with FT-ICR MS

Baiyi Xue , Sandra Alves , François Fenaille , Benoit Colsh , Jean-Claude Tabet , et al.
TGE FT-ICR Users’ Meeting, May 2014, Paris, France
Conference papers hal-01435384v1
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Cwp19 Is a Novel Lytic Transglycosylase Involved in Stationary-Phase Autolysis Resulting in Toxin Release in Clostridium difficile

Sandra Wydau-Dematteis , Imane El Meouche , Pascal Courtin , Audrey Hamiot , René Lai-Kuen , et al.
mBio, 2018, 9 (3), pp.1-19. ⟨10.1128/mBio.00648-18⟩
Journal articles pasteur-02164689v1

Multiplex Quantification of Protein Toxins in Human Biofluids and Food Matrices Using Immunoextraction and High-Resolution Targeted Mass Spectrometry

Mathieu Dupré , Benoit Gilquin , François Fenaille , Cecile Féraudet-Tarisse , Julie Dano , et al.
Analytical Chemistry, 2015, 87 (16), pp.8473-8480. ⟨10.1021/acs.analchem.5b01900⟩
Journal articles hal-02083903v1

Bacterial Detection Using Unlabeled Phage Amplification and Mass Spectrometry through Structural and Nonstructural Phage Markers

Armelle Martelet , Guillaume L’hostis , Paulo Tavares , Sandrine Brasilès , François Fenaille , et al.
Journal of Proteome Research, 2014, 13 (3), pp.1450--1465. ⟨10.1021/pr400991t⟩
Journal articles hal-01664183v1
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Les biomarqueurs de l’intoxication par l’ypérite

Christophe Piérard , Nicolas Taudon , François Fenaille , Thierry Douki
L'Actualité Chimique, 2019, 440, pp.19-22
Journal articles hal-02565929v1

Complementarity of electrophoretic, mass spectrometric, and gene sequencing techniques for the diagnosis and characterization of congenital disorders of glycosylation

Arnaud Bruneel , Sophie Cholet , Valérie Drouin-Garraud , Marie-Line Jacquemont , Aline Cano , et al.
Electrophoresis, 2018, 39 (24), pp.1-10. ⟨10.1002/elps.201800021⟩
Journal articles hal-02623303v1

A multidrug ABC transporter with a taste for GTP

Cedric Orelle , Claire Durmort , Khadija Mathieu , Benjamin Duchêne , Sandrine Aros , et al.
Scientific Reports, 2018, 8 (1), pp.2309. ⟨10.1038/s41598-018-20558-z⟩
Journal articles hal-01726171v1

Differential Mass Spectrometry Profiles of Tau Protein in the Cerebrospinal Fluid of Patients with Alzheimer’s Disease, Progressive Supranuclear Palsy, and Dementia with Lewy Bodies

Nicolas Barthélemy , Audrey Gabelle , Christophe Hirtz , François Fenaille , Nicolas Sergeant , et al.
Journal of Alzheimer's Disease, 2016, 51 (4), pp.1033 - 1043. ⟨10.3233/JAD-150962⟩
Journal articles hal-01842422v1

Quantitative Assessment of SARS-CoV-2 Virus in Nasopharyngeal Swabs Stored in Transport Medium by a Straightforward LC-MS/MS Assay Targeting Nucleocapsid, Membrane, and Spike Proteins

Justyna Saadi , Saoussen Oueslati , Laurent Bellanger , Fabrice Gallais , Laurent Dortet , et al.
Journal of Proteome Research, 2021, ⟨10.1021/acs.jproteome.0c00887⟩
Journal articles hal-03351882v1
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Comparative Evaluation of Data Dependent and Data Independent Acquisition Workflows Implemented on an Orbitrap Fusion for Untargeted Metabolomics

Pierre Barbier Saint Hilaire , Kathleen Rousseau , Alexandre Seyer , Sylvain Dechaumet , Annelaure Damont , et al.
Metabolites, 2020, 10 (4), pp.1-17. ⟨10.3390/metabo10040158⟩
Journal articles hal-03321131v1

Development of a standard protocol for high-throughput metabolome profiling of urine using DI-ESI coupled with FT-ICR MS

Baiyi Xue , Sandra Alves , Jean-Claude Tabet , Richard B. Cole , Alain Paris , et al.
62. ASMS Conference on Mass Spectrometry and Allied Topics, Jun 2014, Baltimore, United States. 2014
Conference poster hal-01433700v1
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Deep analysis of immune response and metabolic signature in children with food protein induced enterocolitis to cow's milk

Karine Adel-Patient , Guillaume Lezmi , Florence Castelli , Sibylle Blanc , Herve H. Bernard , et al.
Clinical and Translational Allergy, 2018, 8, ⟨10.1186/s13601-018-0224-9⟩
Journal articles hal-02622128v1

CCDC115-CDG: A new rare and misleading inherited cause of liver disease

Muriel Girard , Aurélia Poujois , Monique Fabre , Florence Lacaille , Dominique Debray , et al.
Molecular Genetics and Metabolism, 2018, 124 (3), pp.228-235. ⟨10.1016/j.ymgme.2018.05.002⟩
Journal articles hal-02623414v1

Development of a mass spectrometry imaging method for detecting and mapping graphene oxide nanoparticles in rodent tissues

Helene Cazier , Carole Malgorn , Nathalie Fresneau , Dominique Georgin , Antoine Sallustrau , et al.
Journal of The American Society for Mass Spectrometry, 2020, 31 (5), pp.1025-1036. ⟨10.1021/jasms.9b00070⟩
Journal articles cea-02532123v1

Low-Protein Diet Induces IRE1α-Dependent Anticancer Immunosurveillance

Camila Rubio-Patiño , Jozef P Bossowski , Gian Marco de Donatis , Laura Mondragón , Elodie Villa , et al.
Cell Metabolism, 2018, 27 (4), pp.828-842.e7. ⟨10.1016/j.cmet.2018.02.009⟩
Journal articles hal-01778379v1

Tau Protein Quantification in Human Cerebrospinal Fluid by Targeted Mass Spectrometry at High Sequence Coverage Provides Insights into Its Primary Structure Heterogeneity

Nicolas Barthélemy , François Fenaille , Christophe Hirtz , Nicolas Sergeant , Susanna Schraen-Maschke , et al.
Journal of Proteome Research, 2016, 15 (2), pp.667 - 676. ⟨10.1021/acs.jproteome.5b01001⟩
Journal articles hal-01842426v1

Ricin Antibodies’ Neutralizing Capacity against Different Ricin Isoforms and Cultivars

Maria Lucia Orsini Delgado , Arnaud Avril , Julie Prigent , Julie Dano , Audrey Rouaix , et al.
Toxins, 2021, 13 (2), ⟨10.3390/toxins13020100⟩
Journal articles hal-03351910v1
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High throughput screening identifies disulfide isomerase DsbC as a very efficient partner for recombinant expression of small disulfide-rich proteins in E. coli

Hervé Nozach , Carole Fruchart-Gaillard , François Fenaille , Fabrice Beau , Oscar Pereira Ramos , et al.
Microbial Cell Factories, 2013, 12, ⟨10.1186/1475-2859-12-37⟩
Journal articles cea-02100032v1
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The effect of acute moderate-intensity exercise on the serum and fecal metabolomes and the gut microbiota of cross-country endurance athletes

Jose Angel García-Merino , Diego Moreno-Pérez , Emeline Chu Van , Mar Larrosa , Mariangela Tabone , et al.
Scientific Reports, 2021, 11 (1), pp.1-12. ⟨10.1038/s41598-021-82947-1⟩
Journal articles hal-03321433v1

Immune components of early breastmilk: Association with maternal factors and with reported food allergy in childhood

Mikaïl Berdi , Blandine de Lauzon-Guillain , Anne Forhan , Florence Anne Castelli , François Fenaille , et al.
Pediatric Allergy and Immunology, 2019, 30 (1), pp.107-116. ⟨10.1111/pai.12998⟩
Journal articles hal-02619781v1

Rapid detection of abrin toxin and its isoforms in complex matrices by immuno-extraction and quantitative high resolution targeted mass spectrometry

Eva-Maria Hansbauer , Sylvia Worbs , Hervé Volland , Stéphanie Simon , Christophe Junot , et al.
Analytical Chemistry, 2017, 89 (21), pp.11719-11727. ⟨10.1021/acs.analchem.7b03189⟩
Journal articles hal-02625992v1
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Small Mass but Strong Information: Diagnostic Ions Provide Crucial Clues to Correctly Identify Histone Lysine Modifications

Alaa Hseiky , Marion Crespo , Sylvie Kieffer-Jaquinod , François Fenaille , Delphine Pflieger
Proteomes, 2021, 9 (2), ⟨10.3390/proteomes9020018⟩
Journal articles hal-03389071v1

Chromatin-to-nucleoprotamine transition is controlled by the histone H2B variant TH2B.

Emilie Montellier , Fayçal Boussouar , Sophie Rousseaux , Kai Zhang , Thierry Buchou , et al.
Genes and Development, 2013, 27 (15), pp.1680-92
Journal articles hal-01322388v1

Histone Variant H2A.L.2 Guides Transition Protein-Dependent Protamine Assembly in Male Germ Cells

Sophie Barral , Yuichi Morozumi , Hiroki Tanaka , Emilie Montellier , Jérôme Govin , et al.
Molecular Cell, 2017, 66 (1), pp.89-101.e8. ⟨10.1016/j.molcel.2017.02.025⟩
Journal articles hal-02191299v1
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A novel subfamily of bacterial AAT-fold basic amino acid decarboxylases and functional characterization of its first representative: Pseudomonas aeruginosa LdcA

Diego Carriel , Pierre Simon Garcia , Florence Castelli , Patricia Lamourette , François Fenaille , et al.
Genome Biology and Evolution, 2018, 10 (11), pp.3058-3075. ⟨10.1093/gbe/evy228⟩
Journal articles hal-01987296v1
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Histone variant H2A.J accumulates in senescent cells and promotes inflammatory gene expression

Kévin Contrepois , Clément Coudereau , Bérénice Benayoun , Nadine Schüler , Oliver Bischof , et al.
Nature Communications, 2017, 8, pp.14995. ⟨10.1038/ncomms14995⟩
Journal articles cea-02143246v1

Data acquisition workflows in liquid chromatography coupled to high resolution mass spectrometry-based metabolomics: Where do we stand?

François Fenaille , Pierre Barbier Saint Hilaire , Kathleen Rousseau , Christophe Junot
12th Francophone Congress on Separative Sciences and Analytical, Mar 2017, Paris, France. pp.12, ⟨10.1016/j.chroma.2017.10.043⟩
Conference papers hal-02738411v1