The dynamics of fluvial erosion responds to soil erosion and surface runoff on hillslopes due to land use and environmental fragility, conditioned by the soil, geology, relief, and rainfall rate. Despite the increasing problems associated with fluvial erosion in Brazil, little information is available on bedload transport in headwater catchments under intense agricultural activity. Therefore, this study sought to characterize the fluvial erosion processes and bedload dynamics in an experimental catchment in southern Brazil located at the edge of the Brazilian Meridional plateau, which is representative of a large area of high environmental fragility and intense agricultural activity in Southern Brazil. The Guarda Mor River drains a headwater catchment (18.5 km2) with undulating and hilly terrain with fragile soils and intense agricultural activity controlling fine and coarse sediment supply downstream. During 11 major rainfall-runoff events, monitoring was conducted to measure streamflow, bedload transport rates, sediment size, and hydraulic parameters, such as Manning’s n values and viscous layer thicknesses. A rating curve was established based on 40 streamflow and bedload discharge measurements taken at different water levels and stages along the hydrograph. In addition, a river portion (gravel bed) was characterized as well as the granulometric characteristics of its surface and subsurface layers. The results showed that the transport pattern is influenced by factors other than hydraulic parameters alone, including the interdependence between successive events, armoring effects, and hysteresis. These factors are strongly related to the surface runoff and erosion observed on the hillslopes, which define the streamflow energy and the supply of sand fraction, respectively. A discussion is held on the bedload transport dynamics under non-equilibrium conditions in the modeling of fluvial erosion processes